wili,
As you say we may not be able to say the exact way that the permafrost will degrade, but it will be more complicated that m.h. implies as indicated by the following list of repeats posts that I have made about the mechanisms and implications of accelerated permafrost degradation beyond that considered in AR5:
(a) The linked referenced research is potentially very bad news as this indicates that the permafrost may produce large amounts of methane as it decomposes (potentially acting as a very strong positive feedback):
Rhiannon Mondav, Ben J. Woodcroft, Eun-Hae Kim, Carmody K. McCalley, Suzanne B. Hodgkins, Patrick M. Crill, Jeffrey Chanton, Gregory B. Hurst, Nathan C. VerBerkmoes, Scott R. Saleska, Philip Hugenholtz, Virginia I. Rich & Gene W. Tyson, (2014), "Discovery of a novel methanogen prevalent in thawing permafrost", Nature Communications, 5,3212doi:10.1038/ncomms4212
http://www.nature.com/ncomms/2014/140214/ncomms4212/full/ncomms4212.htmlAbstract: "Thawing permafrost promotes microbial degradation of cryo-sequestered and new carbon leading to the biogenic production of methane, creating a positive feedback to climate change. Here we determine microbial community composition along a permafrost thaw gradient in northern Sweden. Partially thawed sites were frequently dominated by a single archaeal phylotype, Candidatus ‘Methanoflorens stordalenmirensis’ gen. nov. sp. nov., belonging to the uncultivated lineage ‘Rice Cluster II’ (Candidatus ‘Methanoflorentaceae’ fam. nov.). Metagenomic sequencing led to the recovery of its near-complete genome, revealing the genes necessary for hydrogenotrophic methanogenesis. These genes are highly expressed and methane carbon isotope data are consistent with hydrogenotrophic production of methane in the partially thawed site. In addition to permafrost wetlands, ‘Methanoflorentaceae’ are widespread in high methane-flux habitats suggesting that this lineage is both prevalent and a major contributor to global methane production. In thawing permafrost, Candidatus ‘M. stordalenmirensis’ appears to be a key mediator of methane-based positive feedback to climate warming."
See also:
http://www.abc.net.au/science/articles/2014/02/20/3948946.htm(b) The linked reference indicates that newly studies factors indicate that greenhouse gas emissions from thawing permafrost will likely be more significant than previously expected:
Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production by Suzanne B. Hodgkinsa,Malak M. Tfailya, Carmody K. McCalleyb, Tyler A. Loganc, Patrick M. Crilld, Scott R. Saleskab, Virginia I. Riche, and Jeffrey P. Chantona, published in PNAS on 7 April 2014. DOI: 10.1073/pnas.1314641111
http://www.pnas.org/content/early/2014/04/02/1314641111Abstract: "Carbon release due to permafrost thaw represents a potentially major positive climate change feedback. The magnitude of carbon loss and the proportion lost as methane (CH4) vs. carbon dioxide (CO2) depend on factors including temperature, mobilization of previously frozen carbon, hydrology, and changes in organic matter chemistry associated with environmental responses to thaw. While the first three of these effects are relatively well understood, the effect of organic matter chemistry remains largely unstudied. To address this gap, we examined the biogeochemistry of peat and dissolved organic matter (DOM) along a ∼40-y permafrost thaw progression from recently- to fully thawed sites in Stordalen Mire (68.35°N, 19.05°E), a thawing peat plateau in northern Sweden. Thaw-induced subsidence and the resulting inundation along this progression led to succession in vegetation types accompanied by an evolution in organic matter chemistry. Peat C/N ratios decreased whereas humification rates increased, and DOM shifted toward lower molecular weight compounds with lower aromaticity, lower organic oxygen content, and more abundant microbially produced compounds. Corresponding changes in decomposition along this gradient included increasing CH4 and CO2 production potentials, higher relative CH4/CO2 ratios, and a shift in CH4 production pathway from CO2 reduction to acetate cleavage. These results imply that subsidence and thermokarst-associated increases in organic matter lability cause shifts in biogeochemical processes toward faster decomposition with an increasing proportion of carbon released as CH4. This impact of permafrost thaw on organic matter chemistry could intensify the predicted climate feedbacks of increasing temperatures, permafrost carbon mobilization, and hydrologic changes."
(c) The linked reference provides evidence that CO₂ emissions from permafrost degradation will likely be higher than previously expected
Rose M. Cory, Collin P. Ward, Byron C. Crump, George W. Kling, (2014), "Sunlight controls water column processing of carbon in arctic fresh waters", Science, Vol. 345, no. 6199 pp. 925-928, DOI: 10.1126/science.1253119
http://www.sciencemag.org/content/345/6199/925Abstract: "Carbon in thawing permafrost soils may have global impacts on climate change; however, the factors that control its processing and fate are poorly understood. The dominant fate of dissolved organic carbon (DOC) released from soils to inland waters is either complete oxidation to CO2 or partial oxidation and river export to oceans. Although both processes are most often attributed to bacterial respiration, we found that photochemical oxidation exceeds rates of respiration and accounts for 70 to 95% of total DOC processed in the water column of arctic lakes and rivers. At the basin scale, photochemical processing of DOC is about one-third of the total CO2 released from surface waters and is thus an important component of the arctic carbon budget."
See also:
http://www.laboratoryequipment.com/news/2014/08/sunlight-controls-fate-permafrosts-released-carbonExtract: "… researchers show for the first time that sunlight, not microbial activity, dominates the production of carbon dioxide in Arctic inland waters.
"Our results suggest that sunlight, rather than biological processes, controls the fate of carbon released from thawing permafrost soils into Arctic surface waters," said aquatic geochemist Rose Cory, first author of the Science paper and an assistant professor in the U-M Department of Earth and Environmental Sciences.
Last year, the same team reported in PNAS that recently exposed carbon from thawed Alaskan permafrost is extremely sensitive to sunlight and can quickly be converted to carbon dioxide. Taken together, the two studies suggest that "we're likely to see more carbon dioxide released from thawing permafrost than people had previously believed," Cory said."
(d) The linked reference has a free access pdf, and indicates that the permafrost carbon feedback (PCF), is too low in all of the AR5 RCP scenarios; and that the PCF can increase the RCP 8.5 mean global temperature increase by also 8% by 2100:
Kevin Schaefer, Hugues Lantuit, Vladimir E Romanovsky, Edward A G Schuur and Ronald Witt, (2014), "The impact of the permafrost carbon feedback on global climate", Environ. Res. Lett. 9 085003, doi:10.1088/1748-9326/9/8/085003
http://iopscience.iop.org/1748-9326/9/8/085003Abstract: "Degrading permafrost can alter ecosystems, damage infrastructure, and release enough carbon dioxide (CO2) and methane (CH4) to influence global climate. The permafrost carbon feedback (PCF) is the amplification of surface warming due to CO2 and CH4 emissions from thawing permafrost. An analysis of available estimates PCF strength and timing indicate 120 ± 85 Gt of carbon emissions from thawing permafrost by 2100. This is equivalent to 5.7 ± 4.0% of total anthropogenic emissions for the Intergovernmental Panel on Climate Change (IPCC) representative concentration pathway (RCP) 8.5 scenario and would increase global temperatures by 0.29 ± 0.21 °C or 7.8 ± 5.7%. For RCP4.5, the scenario closest to the 2 °C warming target for the climate change treaty, the range of cumulative emissions in 2100 from thawing permafrost decreases to between 27 and 100 Gt C with temperature increases between 0.05 and 0.15 °C, but the relative fraction of permafrost to total emissions increases to between 3% and 11%. Any substantial warming results in a committed, long-term carbon release from thawing permafrost with 60% of emissions occurring after 2100, indicating that not accounting for permafrost emissions risks overshooting the 2 °C warming target. Climate projections in the IPCC Fifth Assessment Report (AR5), and any emissions targets based on those projections, do not adequately account for emissions from thawing permafrost and the effects of the PCF on global climate. We recommend the IPCC commission a special assessment focusing on the PCF and its impact on global climate to supplement the AR5 in support of treaty negotiation."
(e) The linked reference finds that degrading permafrost will produce more methane and less carbon dioxide that current Earth System Models assume; which when corrected will significantly increase projections of Arctic amplification:
Zhaosheng Fan, Jason C. Neff, Mark P. Waldrop, Ashley P. Ballantyne, Merritt R. Turetsky, (2014), "Transport of oxygen in soil pore-water systems: implications for modeling emissions of carbon dioxide and methane from peatlands", Biogeochemistry, doi:10.1007/s1053-014-0012-0.
http://link.springer.com/article/10.1007%2Fs10533-014-0012-0#page-1Abstract: "Peatlands store vast amounts of soil carbon and are significant sources of greenhouse gases, including carbon dioxide (CO2) and methane (CH4) emissions. The traditional approach in biogeochemical model simulations of peatland emissions is to simply divide the soil domain into an aerobic zone above and an anaerobic zone below the water table (WT) and then calculate CO2 and CH4 emissions based on the assumed properties of these two discrete zones. However, there are major potential drawbacks associated with the traditional WT-based approach, because aerobic or anaerobic environments are ultimately determined by oxygen (O2) concentration rather than water content directly. Variations in O2 content above and below the WT can be large and thus may play an important role in partitioning of carbon fluxes between CO2 and CH4. In this paper, we propose an oxygen-based approach, which simulates the vertical and radial components of O2 movement and consumption through the soil aerobic and anaerobic environments. We then use both our oxygen-based and the traditional WT-based approaches to simulate CO2 and CH4 emissions from an Alaskan fen peatland. The results of model calibration and validation suggest that our physically realistic approach (i.e., oxygen-based approach) cause less biases on the simulated flux of CO2 and CH4. The results of model simulations also suggest that the traditional WT-based approach might substantially under-estimate CH4 emissions and over-estimate CO2 emissions from the fen due to the presence of anaerobic zones in unsaturated soil. Our oxygen-based approach can be easily incorporated into existing ecosystem or earth system models but will require additional validation with more extensive field observations to be implemented within biogeochemical models to improve simulations of soil C fluxes at regional or global scale."
(f) The linked reference suggests that permafrost thawing is a possible source of the both the abrupt carbon release and the associated abrupt increase in mean global temperature at the onset of the Bolling/Allerod, and that a similar occurrence could happen with continued global warming:
Peter Köhler, Gregor Knorr and Edouard Bard, (2014), "Permafrost thawing as a possible source of abrupt carbon release at the onset of the Bølling/Allerød", Nature Communications 5:5520; DOI: 10.1038/ncomms6520
http://www.nature.com/ncomms/2014/141120/ncomms6520/full/ncomms6520.htmlAbstract: "One of the most abrupt and yet unexplained past rises in atmospheric CO2 (>10 p.p.m.v. in two centuries) occurred in quasi-synchrony with abrupt northern hemispheric warming into the Bølling/Allerød, ~14,600 years ago. Here we use a U/Th-dated record of atmospheric Δ14C from Tahiti corals to provide an independent and precise age control for this CO2 rise. We also use model simulations to show that the release of old (nearly 14C-free) carbon can explain these changes in CO2 and Δ14C. The Δ14C record provides an independent constraint on the amount of carbon released (~125 Pg C). We suggest, in line with observations of atmospheric CH4 and terrigenous biomarkers, that thawing permafrost in high northern latitudes could have been the source of carbon, possibly with contribution from flooding of the Siberian continental shelf during meltwater pulse 1A. Our findings highlight the potential of the permafrost carbon reservoir to modulate abrupt climate changes via greenhouse-gas feedbacks."
See also:
http://www.reportingclimatescience.com/news-stories/article/did-permafrost-melt-cause-abrupt-ice-age-co2-rise.html(g) The following linked article indicate the importance of ecosystem changes as positive feedback mechanisms. The link discusses the role of the artic ground squirrels in accelerating permafrost loss:
Nigel Golden, Susan Natali and Nikita Zimov, (2014), "Consequences of artic ground squirrels on soil carbon loss from Siberian tundra", Fall AGU Conference
https://agu.confex.com/agu/fm14/meetingapp.cgi#Paper/20090Abstract: "A large pool of organic carbon (C) has been accumulating in the Arctic for thousands of years. Much of this C has been frozen in permafrost and unavailable for microbial decomposition. As the climate warms and permafrost thaws, the fate of this large C pool will be driven not only by climatic conditions, but also by ecosystem changes brought about by arctic animal populations. In this project we studied arctic ground squirrels (Spermophilus parryii), which are widely-distributed throughout the Arctic. These social mammals create subterranean burrows that mix soil layers, increase aeration, alter soil moisture and temperature, and redistribute soil nutrients, all of which may impact microbial decomposition. We examined the effects of arctic ground squirrel activity on soil C mineralization in dry heath tundra underlain by continuous permafrost in the Kolyma River watershed in northeast Siberia, Russia. Vegetation cover was greatly reduced on the ground squirrel burrows (80% of ground un-vegetated), compared to undisturbed sites (35% of ground un-vegetated). Soils from ground squirrel burrows were also significantly dryer and warmer. To examine effects of ground squirrel activity on microbial respiration, we conducted an 8-day incubation of soil fromburrows and from adjacent undisturbed tundra. In addition, we assessed the impact of nutrient addition by including treatments with low and high levels of nitrogen addition. Microbial respiration (per gram soil) was three-fold higher in incubated soils from the undisturbed sites compared to soils collected from the burrows. The lower rates of respiration from the disturbed soils may have been a result of lower carbon quality or low soil moisture. High nitrogen addition significantly increased respiration in the undisturbed soils, but not in the disturbed burrow soils, which suggests that microbial respiration in the burrow soils was not primarily limited by nitrogen. These results demonstrate the importance of wildlife activity on soil C vulnerability in the Arctic. As C is moved from protected permafrost pools to thawed soils, burrowing animals, such as the arctic ground squirrel, may play an increasingly important role in regulating the transfer of C from soils to the atmosphere."
Best,
ASLR